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  5. LOC_Os02g30050.1

LOC_Os02g30050.1


Description : component RPL35 of LSU proteome component


Gene families : OG0002158 (Archaeplastida) Phylogenetic Tree(s): OG0002158_tree ,
OG_05_0002518 (LandPlants) Phylogenetic Tree(s): OG_05_0002518_tree ,
OG_06_0003253 (SeedPlants) Phylogenetic Tree(s): OG_06_0003253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g30050.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT2G39390 No alias Ribosomal L29 family protein 0.06 Archaeplastida
AT3G09500 No alias Ribosomal L29 family protein 0.09 Archaeplastida
AT3G55170 No alias Ribosomal L29 family protein 0.05 Archaeplastida
AT5G02610 No alias Ribosomal L29 family protein 0.08 Archaeplastida
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
MA_10429159g0020 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
MA_37003g0010 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
MA_92240g0010 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.02 Archaeplastida
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.07 Archaeplastida
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.08 Archaeplastida
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.02 Archaeplastida
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.05 Archaeplastida
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.06 Archaeplastida
Smo438324 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Smo79331 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Solyc04g010240.3.1 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
Solyc06g075620.3.1 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
Zm00001e008428_P002 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
Zm00001e014607_P001 No alias component RPL35 of LSU proteome component 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 64
No external refs found!