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  5. LOC_Os02g36845.1

LOC_Os02g36845.1


Description : Casparian strip membrane protein 7 OS=Oryza sativa subsp. japonica (sp|q6ep58|casp7_orysj : 231.0)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0001302 (SeedPlants) Phylogenetic Tree(s): OG_06_0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g36845.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.04 Archaeplastida
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.05 Archaeplastida
AMTR_s00016p00177260 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.02 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.05 Archaeplastida
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.03 Archaeplastida
AMTR_s00067p00068460 evm_27.TU.AmTr_v1... Casparian strip membrane protein 1 OS=Malus domestica 0.02 Archaeplastida
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.04 Archaeplastida
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.07 Archaeplastida
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.06 Archaeplastida
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.06 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.06 Archaeplastida
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_26811 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_26814 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
LOC_Os04g38690.1 No alias Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.05 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.08 Archaeplastida
LOC_Os05g15630.1 No alias CASP-like protein BLE3 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os07g26110.1 No alias CASP-like protein 1D1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g01160.1 No alias Casparian strip membrane protein 2 OS=Oryza sativa... 0.03 Archaeplastida
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.02 Archaeplastida
MA_10429324g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_90653g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 Archaeplastida
Mp3g16500.1 No alias CASP-like protein 1U1 OS=Marchantia polymorpha... 0.02 Archaeplastida
Pp3c10_17030V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c12_23940V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c4_1550V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Solyc01g067330.3.1 No alias CASP-like protein 1E1 OS=Glycine max... 0.03 Archaeplastida
Solyc02g069730.3.1 No alias CASP-like protein 1B1 OS=Ricinus communis... 0.06 Archaeplastida
Solyc03g097720.4.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.03 Archaeplastida
Solyc04g005620.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.04 Archaeplastida
Solyc06g074230.3.1 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.03 Archaeplastida
Solyc09g010200.4.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Solyc10g083250.2.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e003216_P001 No alias CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.04 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.06 Archaeplastida
Zm00001e009346_P001 No alias CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 309.0) 0.02 Archaeplastida
Zm00001e015806_P001 No alias Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.04 Archaeplastida
Zm00001e017631_P001 No alias CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.03 Archaeplastida
Zm00001e024279_P001 No alias Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.06 Archaeplastida
Zm00001e026902_P001 No alias CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 39 185
No external refs found!