LOC_Os02g38090.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g38090.1
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00098700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00017p00232330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
AMTR_s00026p00180130	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF084...	0.02	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00095p00094910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G24590	DRN-LIKE, ESR2,...	DORNROSCHEN-like	0.11	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.04	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.05	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.09	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.04	Archaeplastida
AT3G14230	RAP2.2	related to AP2 2	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.05	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.05	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.03	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.02	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Cre14.g620500	No alias	No description available	0.02	Archaeplastida
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
GSVIVT01021060001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_08642	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.03	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os07g22770.1	No alias	no description available(sp\|a0a3q7i5y9\|erfc3_sollc : 90.1)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_104992g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_132427g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_28894g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_96512g0020	No alias	Ethylene-responsive transcription factor ERF071...	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c15_1990V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c16_4710V3.1	No alias	ethylene response factor 7	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.04	Archaeplastida
Pp3c6_28370V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c7_1240V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo38494	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Smo68470	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077360.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.02	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g093610.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.08	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.02	Archaeplastida
Solyc04g007170.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc04g078640.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g007820.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g007830.1.1	No alias	Dehydration-responsive element-binding protein 1F...	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050970.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019566_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e021282_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.14	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.04	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.08	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e037241_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	57	107

External Links

No external refs found!

LOC_Os02g38090.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation