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  5. LOC_Os02g39590.1

LOC_Os02g39590.1


Description : GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana (sp|q9shp6|gdl10_arath : 213.0)


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0012318 (SeedPlants) Phylogenetic Tree(s): OG_06_0012318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39590.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00212280 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G28570 No alias SGNH hydrolase-type esterase superfamily protein 0.03 Archaeplastida
AT1G28580 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
LOC_Os03g25030.1 No alias Sinapine esterase OS=Brassica napus... 0.05 Archaeplastida
LOC_Os05g11910.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g099040.4.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 Archaeplastida
Solyc03g006250.2.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e006337_P001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e011116_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016450_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e020313_P001 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026050_P001 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030693_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e031161_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 45 387
No external refs found!