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  5. LOC_Os02g42440.1

LOC_Os02g42440.1


Description : Putative GEM-like protein 8 OS=Arabidopsis thaliana (sp|q9fmw4|geml8_arath : 193.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000920 (LandPlants) Phylogenetic Tree(s): OG_05_0000920_tree ,
OG_06_0000471 (SeedPlants) Phylogenetic Tree(s): OG_06_0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42440.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G28200 FIP1 FH interacting protein 1 0.03 Archaeplastida
AT5G23370 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
GSVIVT01019136001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g08860.1 No alias GEM-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g52670.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g29120.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10255128g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c18_13230V3.1 No alias GRAM domain family protein 0.02 Archaeplastida
Solyc03g098660.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g011590.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007528_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e010801_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e012085_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e023068_P001 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023069_P001 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e039556_P001 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041280_P002 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 110 229
No external refs found!