LOC_Os02g43560.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g43560.1
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00067720	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00078p00145410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.02	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.04	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.02	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	Archaeplastida
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022259001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01028823001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01030174001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01034148001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01037686001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
Gb_26894	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os02g47060.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
LOC_Os05g45230.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_101135g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_136551g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c23_10680V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.02	Archaeplastida
Solyc01g079260.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc02g094270.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g072070.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g048870.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g067340.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.08	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.05	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025758_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e026629_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e031159_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e033860_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	164	185

External Links

No external refs found!

LOC_Os02g43560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation