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  5. AMTR_s00003p00091000

AMTR_s00003p00091000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.54

Description : Carbohydrate metabolism.raffinose family oligosaccharide biosynthesis.stachyose synthase


Gene families : OG0000586 (Archaeplastida) Phylogenetic Tree(s): OG0000586_tree ,
OG_05_0004410 (LandPlants) Phylogenetic Tree(s): OG_05_0004410_tree ,
OG_06_0011397 (SeedPlants) Phylogenetic Tree(s): OG_06_0011397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00091000
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 evm_27.TU.AmTr_v1... Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 Archaeplastida
AMTR_s00008p00154720 evm_27.TU.AmTr_v1... Probable galactinol--sucrose galactosyltransferase 2... 0.03 Archaeplastida
AMTR_s00021p00147100 evm_27.TU.AmTr_v1... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.04 Archaeplastida
AT4G01970 AtSTS, STS stachyose synthase 0.03 Archaeplastida
GSVIVT01004662001 No alias Probable galactinol--sucrose galactosyltransferase 2... 0.03 Archaeplastida
Gb_07183 No alias stachyose synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 21 845
No external refs found!