- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)
Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0001067 (LandPlants) Phylogenetic Tree(s): OG_05_0001067_tree ,
OG_06_0001032 (SeedPlants) Phylogenetic Tree(s): OG_06_0001032_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g46970.1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00213640 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| AT1G51680 | 4CL1, AT4CL1, 4CL.1 | 4-coumarate:CoA ligase 1 | 0.03 | Archaeplastida | |
| AT1G65060 | 4CL3 | 4-coumarate:CoA ligase 3 | 0.05 | Archaeplastida | |
| AT5G38120 | 4CL8 | AMP-dependent synthetase and ligase family protein | 0.04 | Archaeplastida | |
| GSVIVT01008694001 | No alias | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01024400001 | No alias | 4-coumarate--CoA ligase 2 OS=Glycine max | 0.06 | Archaeplastida | |
| Gb_41091 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | Archaeplastida | |
| LOC_Os02g08100.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | Archaeplastida | |
| LOC_Os06g44620.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | Archaeplastida | |
| MA_109119g0010 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | Archaeplastida | |
| MA_56692g0010 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.04 | Archaeplastida | |
| Mp1g05060.1 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Mp5g01200.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.08 | Archaeplastida | |
| Pp3c18_6360V3.1 | No alias | 4-coumarate:CoA ligase 3 | 0.02 | Archaeplastida | |
| Pp3c19_13170V3.1 | No alias | 4-coumarate:CoA ligase 3 | 0.03 | Archaeplastida | |
| Pp3c22_15350V3.1 | No alias | 4-coumarate:CoA ligase 3 | 0.05 | Archaeplastida | |
| Pp3c3_24370V3.1 | No alias | AMP-dependent synthetase and ligase family protein | 0.02 | Archaeplastida | |
| Smo173133 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| Smo177393 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| Smo177466 | No alias | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Smo181279 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Solyc03g097030.3.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.05 | Archaeplastida | |
| Solyc03g111170.3.1 | No alias | 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc03g117870.3.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.06 | Archaeplastida | |
| Solyc07g008360.2.1 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.03 | Archaeplastida | |
| Zm00001e013798_P002 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.02 | Archaeplastida | |
| Zm00001e023286_P002 | No alias | p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) | 0.16 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| No external refs found! |