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  5. AMTR_s00003p00107900

AMTR_s00003p00107900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.73

No description available


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00107900
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Gb_02187 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g46390.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g49790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g37400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435514g0030 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_120712g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_440140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5629g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8097895g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_813524g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9395g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_12850V3.1 No alias Protein of unknown function, DUF538 0.02 Archaeplastida
Solyc01g100750.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g076890.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018189_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020996_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 28 141
No external refs found!