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  5. LOC_Os02g49070.1

LOC_Os02g49070.1


Description : class III ARF-GAP ARF-GTPase-activating protein


Gene families : OG0000234 (Archaeplastida) Phylogenetic Tree(s): OG0000234_tree ,
OG_05_0001457 (LandPlants) Phylogenetic Tree(s): OG_05_0001457_tree ,
OG_06_0001064 (SeedPlants) Phylogenetic Tree(s): OG_06_0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49070.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Pp3c22_3770V3.1 No alias ARF-GAP domain 13 0.02 Archaeplastida
Solyc06g053390.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015687_P004 No alias class III ARF-GAP ARF-GTPase-activating protein 0.04 Archaeplastida
Zm00001e023402_P004 No alias class III ARF-GAP ARF-GTPase-activating protein 0.04 Archaeplastida
Zm00001e028315_P003 No alias class III ARF-GAP ARF-GTPase-activating protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 177 263
IPR001164 ArfGAP_dom 21 136
No external refs found!