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  5. LOC_Os02g50360.1

LOC_Os02g50360.1


Description : component NCT of gamma secretase complex


Gene families : OG0005674 (Archaeplastida) Phylogenetic Tree(s): OG0005674_tree ,
OG_05_0007208 (LandPlants) Phylogenetic Tree(s): OG_05_0007208_tree ,
OG_06_0010668 (SeedPlants) Phylogenetic Tree(s): OG_06_0010668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50360.1
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00021290 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.endomembrane... 0.05 Archaeplastida
Cpa|evm.model.tig00021432.17 No alias Protein modification.peptide maturation.endomembrane... 0.01 Archaeplastida
GSVIVT01030701001 No alias Protein modification.peptide maturation.endomembrane... 0.04 Archaeplastida
Mp5g17410.1 No alias component NCT of gamma secretase complex 0.02 Archaeplastida
Smo93800 No alias Protein modification.peptide maturation.endomembrane... 0.03 Archaeplastida
Zm00001e023501_P003 No alias component NCT of gamma secretase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006906 vesicle fusion IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016050 vesicle organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0061025 membrane fusion IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090174 organelle membrane fusion IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!