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  5. LOC_Os02g50840.2

LOC_Os02g50840.2


Description : no hits & (original description: none)


Gene families : OG0001277 (Archaeplastida) Phylogenetic Tree(s): OG0001277_tree ,
OG_05_0002284 (LandPlants) Phylogenetic Tree(s): OG_05_0002284_tree ,
OG_06_0002463 (SeedPlants) Phylogenetic Tree(s): OG_06_0002463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50840.2
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.07 Archaeplastida
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 Archaeplastida
Cre01.g048850 No alias No description available 0.03 Archaeplastida
Cre06.g292650 No alias No description available 0.02 Archaeplastida
GSVIVT01007806001 No alias No description available 0.06 Archaeplastida
GSVIVT01032521001 No alias No description available 0.03 Archaeplastida
Gb_05690 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10099013g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10428034g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10432920g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_39143g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_39143g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_710118g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp4g16230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_22570V3.1 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Archaeplastida
Pp3c7_2900V3.1 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Archaeplastida
Solyc03g114060.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc06g071350.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e002441_P003 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e037792_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e037793_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
InterPro domains Description Start Stop
IPR017923 TFIIS_N 399 448
IPR001025 BAH_dom 91 197
No external refs found!