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  5. LOC_Os02g51780.1

LOC_Os02g51780.1


Description : DIS3-like exonuclease 2 OS=Arabidopsis thaliana (sp|p0dm58|di3l2_arath : 795.0)


Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree ,
OG_05_0007837 (LandPlants) Phylogenetic Tree(s): OG_05_0007837_tree ,
OG_06_0008891 (SeedPlants) Phylogenetic Tree(s): OG_06_0008891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g51780.1
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.22 No alias Exosome complex exonuclease RRP44 homolog A... 0.02 Archaeplastida
GSVIVT01022300001 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 Archaeplastida
MA_15005g0010 No alias Exosome complex exonuclease RRP44 homolog A... 0.03 Archaeplastida
MA_207701g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_40294g0010 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g18110.1 No alias Exosome complex exonuclease RRP44 homolog A... 0.03 Archaeplastida
Smo445658 No alias Exosome complex exonuclease RRP44 homolog A... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!