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  5. LOC_Os02g52260.1

LOC_Os02g52260.1


Description : no hits & (original description: none)


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0017970 (LandPlants) Phylogenetic Tree(s): OG_05_0017970_tree ,
OG_06_0017539 (SeedPlants) Phylogenetic Tree(s): OG_06_0017539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52260.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 Archaeplastida
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 Archaeplastida
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.1 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 Archaeplastida
Cpa|evm.model.tig00000849.28 No alias No description available 0.01 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
LOC_Os10g39150.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.09 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.09 Archaeplastida
Pp3c16_11960V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_14681V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c20_4990V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c23_20770V3.1 No alias No annotation 0.05 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.05 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.06 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
Zm00001e015912_P002 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.07 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 132 205
No external refs found!