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LOC_Os02g53000.1


Description : LysM domain-containing GPI-anchored protein LYP6 OS=Oryza sativa subsp. japonica (sp|q69t51|lyp6_orysj : 436.0)


Gene families : OG0001821 (Archaeplastida) Phylogenetic Tree(s): OG0001821_tree ,
OG_05_0001339 (LandPlants) Phylogenetic Tree(s): OG_05_0001339_tree ,
OG_06_0003475 (SeedPlants) Phylogenetic Tree(s): OG_06_0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g53000.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00253890 evm_27.TU.AmTr_v1... LysM domain-containing GPI-anchored protein 1... 0.02 Archaeplastida
AT1G21880 LYM1 lysm domain GPI-anchored protein 1 precursor 0.06 Archaeplastida
Solyc01g112080.3.1 No alias chitin receptor protein kinase (CEBiP) 0.05 Archaeplastida
Solyc11g012870.2.1 No alias LysM domain-containing GPI-anchored protein 1... 0.03 Archaeplastida
Zm00001e015978_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.03 Archaeplastida
Zm00001e019821_P001 No alias LysM domain-containing GPI-anchored protein LYP6... 0.03 Archaeplastida
Zm00001e034935_P001 No alias chitin receptor protein kinase (CEBiP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR018392 LysM_dom 183 225
No external refs found!