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  5. LOC_Os02g54060.1

LOC_Os02g54060.1


Description : CPN20 auxiliary co-chaperone involved in RuBisCo assembly. Hsp60-co-chaperone (Hsp20)


Gene families : OG0002206 (Archaeplastida) Phylogenetic Tree(s): OG0002206_tree ,
OG_05_0002586 (LandPlants) Phylogenetic Tree(s): OG_05_0002586_tree ,
OG_06_0003596 (SeedPlants) Phylogenetic Tree(s): OG_06_0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54060.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267680 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.02 Archaeplastida
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.03 Archaeplastida
GSVIVT01008295001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_18360 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida
MA_10430161g0010 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 Archaeplastida
Mp1g10690.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida
Solyc12g009250.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e009881_P001 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 Archaeplastida
Zm00001e023757_P002 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 64 153
IPR020818 Chaperonin_GroES 162 253
No external refs found!