Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0004282 (Archaeplastida) Phylogenetic Tree(s): OG0004282_tree ,
OG_05_0003486 (LandPlants) Phylogenetic Tree(s): OG_05_0003486_tree ,
OG_06_0017014 (SeedPlants) Phylogenetic Tree(s): OG_06_0017014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT1G29270
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00030410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT3G56220 No alias transcription regulators 0.03 Archaeplastida
GSVIVT01020751001 No alias No description available 0.11 Archaeplastida
GSVIVT01032720001 No alias No description available 0.07 Archaeplastida
LOC_Os03g21970.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031535_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0045168 cell-cell signaling involved in cell fate commitment IEP Neighborhood
BP GO:0048629 trichome patterning IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!