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  5. LOC_Os02g55970.1

LOC_Os02g55970.1


Description : Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana (sp|q9lhs0|cap10_arath : 501.0)


Gene families : OG0000302 (Archaeplastida) Phylogenetic Tree(s): OG0000302_tree ,
OG_05_0000981 (LandPlants) Phylogenetic Tree(s): OG_05_0000981_tree ,
OG_06_0005759 (SeedPlants) Phylogenetic Tree(s): OG_06_0005759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g55970.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00058730 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.07 Archaeplastida
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Gb_35012 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 Archaeplastida
LOC_Os06g07830.1 No alias Putative clathrin assembly protein At5g35200... 0.03 Archaeplastida
MA_10263988g0010 No alias Putative clathrin assembly protein At2g25430... 0.02 Archaeplastida
MA_10432705g0010 No alias Putative clathrin assembly protein At2g25430... 0.02 Archaeplastida
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 Archaeplastida
Pp3c15_5750V3.1 No alias ENTH/ANTH/VHS superfamily protein 0.04 Archaeplastida
Pp3c18_3170V3.1 No alias ENTH/ANTH/VHS superfamily protein 0.02 Archaeplastida
Pp3c21_20120V3.1 No alias ENTH/ANTH/VHS superfamily protein 0.02 Archaeplastida
Pp3c2_4270V3.1 No alias epsin N-terminal homology (ENTH) domain-containing... 0.02 Archaeplastida
Solyc07g007820.3.1 No alias Putative clathrin assembly protein At5g35200... 0.04 Archaeplastida
Solyc12g010530.3.1 No alias Putative clathrin assembly protein At5g35200... 0.05 Archaeplastida
Zm00001e001222_P002 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.01 Archaeplastida
Zm00001e013776_P003 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 Archaeplastida
Zm00001e029642_P001 No alias Putative clathrin assembly protein At2g25430... 0.03 Archaeplastida
Zm00001e031059_P001 No alias Putative clathrin assembly protein At5g35200... 0.05 Archaeplastida
Zm00001e036365_P001 No alias Putative clathrin assembly protein At5g35200... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011417 ANTH_dom 32 299
No external refs found!