1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g57490.1

LOC_Os02g57490.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57490.1

Target Alias Description ECC score Gene Family Method Actions
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.02 Archaeplastida
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT2G45420 LBD18 LOB domain-containing protein 18 0.04 Archaeplastida
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.05 Archaeplastida
GSVIVT01028294001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_962403g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g083930.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc09g066260.4.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc09g066270.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e000391_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e038582_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e042347_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e042348_P001 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e042443_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e042448_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

-Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 21 118
No external refs found!