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  5. AMTR_s00003p00194360

AMTR_s00003p00194360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.175

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RIMA nuclear import factor


Gene families : OG0007472 (Archaeplastida) Phylogenetic Tree(s): OG0007472_tree ,
OG_05_0007946 (LandPlants) Phylogenetic Tree(s): OG_05_0007946_tree ,
OG_06_0008682 (SeedPlants) Phylogenetic Tree(s): OG_06_0008682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00194360
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cre12.g532700 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Neighborhood
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007308 Rtr1/RPAP2 34 108
No external refs found!