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  5. LOC_Os03g03760.1

LOC_Os03g03760.1


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03760.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028403001 No alias Nutrient uptake.phosphorus assimilation.phosphate... 0.04 Archaeplastida
GSVIVT01030315001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.08 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g46940.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os08g33050.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo417629 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc02g080860.3.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc06g008200.3.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e000237_P002 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e021698_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 23 73
No external refs found!