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  5. LOC_Os03g06080.1

LOC_Os03g06080.1


Description : Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana (sp|q67zw1|hip27_arath : 120.0)


Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000107 (LandPlants) Phylogenetic Tree(s): OG_05_0000107_tree ,
OG_06_0006281 (SeedPlants) Phylogenetic Tree(s): OG_06_0006281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06080.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00210890 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00202p00016130 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
AT1G30473 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT5G05365 No alias Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
AT5G66110 HIPP27 Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
GSVIVT01018723001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.05 Archaeplastida
GSVIVT01018725001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.05 Archaeplastida
GSVIVT01022185001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_09171 No alias Heavy metal-associated isoprenylated plant protein 20... 0.09 Archaeplastida
Gb_20917 No alias Heavy metal-associated isoprenylated plant protein 20... 0.07 Archaeplastida
Gb_21296 No alias Heavy metal-associated isoprenylated plant protein 30... 0.02 Archaeplastida
Gb_37169 No alias Heavy metal-associated isoprenylated plant protein 37... 0.03 Archaeplastida
Gb_38910 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g22490.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428986g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_165810g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_175196g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 Archaeplastida
MA_40458g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_525649g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
Mp7g16230.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g083550.2.1 No alias Heavy metal-associated isoprenylated plant protein 26... 0.06 Archaeplastida
Solyc11g073020.3.1 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e000435_P001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.11 Archaeplastida
Zm00001e018734_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029729_P001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.03 Archaeplastida
Zm00001e039336_P002 No alias Heavy metal-associated isoprenylated plant protein 32... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 31 87
No external refs found!