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Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana (sp|q8gyd9|sde3_arath : 1035.0)
Gene families : OG0002518 (Archaeplastida) Phylogenetic Tree(s): OG0002518_tree ,
OG_05_0003674 (LandPlants) Phylogenetic Tree(s): OG_05_0003674_tree ,
OG_06_0003078 (SeedPlants) Phylogenetic Tree(s): OG_06_0003078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g06440.2 | |
| Cluster | HCCA: Cluster_357 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00272090 | evm_27.TU.AmTr_v1... | Probable RNA helicase SDE3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01018011001 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| Gb_16361 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| MA_10434025g0010 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Pp3c12_8920V3.1 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Archaeplastida | |
| Smo430895 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc06g054020.3.1 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| Zm00001e000456_P001 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005875 | microtubule associated complex | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007051 | spindle organization | IEP | Neighborhood |
| MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0051225 | spindle assembly | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| CC | GO:0070652 | HAUS complex | IEP | Neighborhood |
| BP | GO:0070925 | organelle assembly | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |