1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g06920.1

LOC_Os03g06920.1


Description : chromatin remodeling factor (DRD1). component DRD1 of DNA methylation accessory complex (DDR)


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0001964 (LandPlants) Phylogenetic Tree(s): OG_05_0001964_tree ,
OG_06_0001705 (SeedPlants) Phylogenetic Tree(s): OG_06_0001705_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06920.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g25390.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.03 Archaeplastida
Smo441121 No alias SNF2 domain-containing protein CLASSY 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g060460.2.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.03 Archaeplastida
Zm00001e023137_P001 No alias RDR2-polymerase regulator protein CLSY3/4 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 1007 1120
IPR000330 SNF2_N 652 949
No external refs found!