LOC_Os03g06930.1

Description : transcription factor (BEL)

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0000919 (SeedPlants) Phylogenetic Tree(s): OG_06_0000919_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g06930.1
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AT1G75410	BLH3	BEL1-like homeodomain 3	0.04	Archaeplastida
AT2G27220	BLH5	BEL1-like homeodomain 5	0.05	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.03	Archaeplastida
AT2G35940	EDA29, BLH1	BEL1-like homeodomain 1	0.03	Archaeplastida
AT4G32980	ATH1	homeobox gene 1	0.04	Archaeplastida
AT4G34610	BLH6	BEL1-like homeodomain 6	0.02	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.04	Archaeplastida
GSVIVT01016458001	No alias	Solute transport.carrier-mediated transport.MFS...	0.02	Archaeplastida
GSVIVT01019043001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01025220001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01037575001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_22513	No alias	transcription factor (BEL)	0.02	Archaeplastida
Gb_36166	No alias	transcription factor (BEL)	0.04	Archaeplastida
Gb_39741	No alias	transcription factor (BEL)	0.03	Archaeplastida
MA_6763g0010	No alias	transcription factor (BEL)	0.02	Archaeplastida
MA_76835g0010	No alias	transcription factor (BEL)	0.03	Archaeplastida
Mp5g11060.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp8g18310.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Pp3c13_7150V3.1	No alias	BEL1-like homeodomain 6	0.02	Archaeplastida
Pp3c15_11880V3.1	No alias	BEL1-like homeodomain 7	0.03	Archaeplastida
Solyc01g109980.4.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc02g065490.4.1	No alias	transcription factor (BEL)	0.04	Archaeplastida
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc04g080790.3.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.06	Archaeplastida
Zm00001e000495_P001	No alias	transcription factor (BEL)	0.05	Archaeplastida
Zm00001e002206_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e003327_P001	No alias	transcription factor (BEL)	0.04	Archaeplastida
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e024626_P004	No alias	transcription factor (BEL)	0.12	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016778	diphosphotransferase activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0048038	quinone binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006563	POX_dom	145	280
IPR008422	Homeobox_KN_domain	350	389

External Links

No external refs found!

LOC_Os03g06930.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation