LOC_Os03g08490.1

Description : no hits & (original description: none)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0079954 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0068790 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g08490.1
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00111p00051610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.05	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G72360	HRE1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.03	Archaeplastida
AT2G33710	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.06	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_03828	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26067	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_41445	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os07g22770.1	No alias	no description available(sp\|a0a3q7i5y9\|erfc3_sollc : 90.1)	0.05	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.06	Archaeplastida
LOC_Os10g41330.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_10427586g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10431706g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10431882g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_2040g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_65190g0010	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
MA_65877g0010	No alias	Dehydration-responsive element-binding protein 3...	0.05	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c1_27630V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.02	Archaeplastida
Pp3c3_13510V3.1	No alias	ethylene responsive element binding factor 2	0.02	Archaeplastida
Pp3c3_31490V3.1	No alias	C-repeat-binding factor 4	0.02	Archaeplastida
Pp3c3_31500V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Smo38500	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.06	Archaeplastida
Solyc02g077360.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g093610.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g114440.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.05	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g082590.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089920.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e010609_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e023159_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e033352_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	91	141

External Links

No external refs found!

LOC_Os03g08490.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation