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  5. LOC_Os03g08580.1

LOC_Os03g08580.1


Description : no hits & (original description: none)


Gene families : OG0004707 (Archaeplastida) Phylogenetic Tree(s): OG0004707_tree ,
OG_05_0003254 (LandPlants) Phylogenetic Tree(s): OG_05_0003254_tree ,
OG_06_0002980 (SeedPlants) Phylogenetic Tree(s): OG_06_0002980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08580.1
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT4G33980 No alias BEST Arabidopsis thaliana protein match is: cold... 0.06 Archaeplastida
AT5G42900 COR27 cold regulated gene 27 0.07 Archaeplastida
GSVIVT01009490001 No alias No description available 0.05 Archaeplastida
GSVIVT01024176001 No alias No description available 0.04 Archaeplastida
GSVIVT01031734001 No alias No description available 0.04 Archaeplastida
Smo448001 No alias No description available 0.02 Archaeplastida
Solyc04g078880.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e000619_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!