1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g10210.1

LOC_Os03g10210.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0003020 (SeedPlants) Phylogenetic Tree(s): OG_06_0003020_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10210.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G27045 No alias Homeobox-leucine zipper protein family 0.04 Archaeplastida
AT2G22430 HB6, ATHB6 homeobox protein 6 0.02 Archaeplastida
AT2G36610 ATHB22, HB22 homeobox protein 22 0.03 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 Archaeplastida
AT3G01220 ATHB20, HB20 homeobox protein 20 0.04 Archaeplastida
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.03 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.08 Archaeplastida
GSVIVT01019012001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01019655001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01020033001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_04698 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Gb_35116 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Gb_35959 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.06 Archaeplastida
Mp3g02320.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.04 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_36940V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.06 Archaeplastida
Pp3c25_13450V3.1 No alias homeobox 1 0.03 Archaeplastida
Pp3c2_4940V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Pp3c6_2730V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.04 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc02g062960.4.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc02g085630.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc02g087840.3.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Solyc03g082550.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc03g113270.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc05g051460.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc07g062790.1.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc09g008810.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e000659_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e002803_P001 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Zm00001e004824_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e010004_P002 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e022379_P002 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 61 114
No external refs found!