LOC_Os03g10370.1

Description : small GTPase (ARL8)

Gene families : OG0002139 (Archaeplastida) Phylogenetic Tree(s): OG0002139_tree ,
OG_05_0002368 (LandPlants) Phylogenetic Tree(s): OG_05_0002368_tree ,
OG_06_0002398 (SeedPlants) Phylogenetic Tree(s): OG_06_0002398_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g10370.1
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
AT3G49870	ARLA1C, ATARLA1C	ADP-ribosylation factor-like A1C	0.04	Archaeplastida
Cre17.g708250	No alias	External stimuli response.biotic stress.tobamovirus...	0.03	Archaeplastida
Pp3c26_13440V3.1	No alias	ADP-ribosylation factor-like A1C	0.02	Archaeplastida
Smo173564	No alias	External stimuli response.biotic stress.tobamovirus...	0.02	Archaeplastida
Zm00001e000764_P001	No alias	small GTPase (ARL8)	0.05	Archaeplastida
Zm00001e038776_P001	No alias	small GTPase (ARL8)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Neighborhood
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Neighborhood
CC	GO:0008023	transcription elongation factor complex	IEP	Neighborhood
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015693	magnesium ion transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
CC	GO:0070449	elongin complex	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	9	178

External Links

No external refs found!