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  5. LOC_Os03g13960.2

LOC_Os03g13960.2


Description : component DSP4 of DSP snRNA processing complex


Gene families : OG0006681 (Archaeplastida) Phylogenetic Tree(s): OG0006681_tree ,
OG_05_0006481 (LandPlants) Phylogenetic Tree(s): OG_05_0006481_tree ,
OG_06_0007233 (SeedPlants) Phylogenetic Tree(s): OG_06_0007233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13960.2
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT3G07530 No alias CONTAINS InterPro DOMAIN/s: Beta-Casp domain... 0.05 Archaeplastida
Smo414250 No alias Receptor-like protein kinase 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e018893_P002 No alias component DSP4 of DSP snRNA processing complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018142 protein-DNA covalent cross-linking IEP Neighborhood
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 106 262
No external refs found!