- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no description available(sp|q84wt5|xyn5l_arath : 305.0)
Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0004439 (SeedPlants) Phylogenetic Tree(s): OG_06_0004439_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g14010.1 | |
| Cluster | HCCA: Cluster_235 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00086p00056140 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
| AT4G33810 | No alias | Glycosyl hydrolase superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01037825001 | No alias | No description available | 0.03 | Archaeplastida | |
| GSVIVT01037832001 | No alias | No description available | 0.04 | Archaeplastida | |
| GSVIVT01037833001 | No alias | No description available | 0.03 | Archaeplastida | |
| Gb_02219 | No alias | no description available(sp|q84wt5|xyn5l_arath : 355.0) | 0.04 | Archaeplastida | |
| MA_604666g0010 | No alias | No annotation | 0.03 | Archaeplastida | |
| Smo420481 | No alias | No description available | 0.02 | Archaeplastida | |
| Solyc01g106980.2.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc01g107000.3.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Solyc05g051260.3.1 | No alias | no description available(sp|q84wt5|xyn5l_arath : 344.0) | 0.03 | Archaeplastida | |
| Zm00001e001013_P003 | No alias | no description available(sp|q84wt5|xyn5l_arath : 305.0) | 0.04 | Archaeplastida | |
| Zm00001e038772_P001 | No alias | no description available(sp|q84wt5|xyn5l_arath : 392.0) | 0.02 | Archaeplastida | |
| Zm00001e038773_P006 | No alias | no description available(sp|q84wt5|xyn5l_arath : 388.0) | 0.02 | Archaeplastida | |
| Zm00001e040632_P001 | No alias | no description available(sp|q680b7|xyn4_arath : 318.0) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005102 | signaling receptor binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008083 | growth factor activity | IEP | Neighborhood |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0008283 | cell proliferation | IEP | Neighborhood |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0030545 | receptor regulator activity | IEP | Neighborhood |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| MF | GO:0048018 | receptor ligand activity | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001000 | GH10 | 218 | 476 |
| No external refs found! |