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  5. LOC_Os03g17174.1

LOC_Os03g17174.1


Description : component PnsL1 of NDH lumen subcomplex L


Gene families : OG0003592 (Archaeplastida) Phylogenetic Tree(s): OG0003592_tree ,
OG_05_0003587 (LandPlants) Phylogenetic Tree(s): OG_05_0003587_tree ,
OG_06_0012171 (SeedPlants) Phylogenetic Tree(s): OG_06_0012171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17174.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00079180 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 Archaeplastida
AT2G39470 PPL2 PsbP-like protein 2 0.07 Archaeplastida
AT3G55330 PPL1 PsbP-like protein 1 0.06 Archaeplastida
Cre12.g509050 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01016616001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 Archaeplastida
GSVIVT01016618001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
Mp2g21180.1 No alias PPL1 protein involved in PS-II assembly 0.02 Archaeplastida
Pp3c2_13270V3.1 No alias PsbP-like protein 1 0.03 Archaeplastida
Smo139888 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Smo164192 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Solyc03g114930.3.1 No alias PPL1 protein involved in PS-II assembly 0.06 Archaeplastida
Solyc10g054420.2.1 No alias component PnsL1 of NDH lumen subcomplex L 0.02 Archaeplastida
Zm00001e001257_P001 No alias component PnsL1 of NDH lumen subcomplex L 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002683 PsbP 79 226
No external refs found!