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  5. LOC_Os03g18110.1

LOC_Os03g18110.1


Description : Protein PMR5 OS=Arabidopsis thaliana (sp|q9luz6|tbl44_arath : 390.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18110.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00135110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00034050 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 34 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.03 Archaeplastida
AT2G42570 TBL39 TRICHOME BIREFRINGENCE-LIKE 39 0.07 Archaeplastida
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.04 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.05 Archaeplastida
GSVIVT01000843001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01001005001 No alias Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032748001 No alias Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10738 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36284 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
LOC_Os03g60300.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
MA_31151g0010 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
MA_366027g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_467548g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_53397g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Mp2g11180.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.04 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Solyc03g096030.3.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc06g007170.4.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g053330.2.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc07g055800.2.1 No alias Protein trichome birefringence-like 43 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g062210.4.1 No alias Protein trichome birefringence-like 37 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g008030.4.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
Solyc10g076570.2.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc11g005790.3.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e001317_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e038413_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e041204_P001 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 51 106
IPR026057 PC-Esterase 107 388
No external refs found!