LOC_Os03g25120.1


Description : transcription factor (HSF)


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25120.1
Cluster HCCA: Cluster_668

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00033500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.01 Archaeplastida
GSVIVT01002066001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01033257001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.01 Archaeplastida
Gb_11758 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 Archaeplastida
Gb_19891 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os01g43590.1 No alias transcription factor (HSF) 0.06 Archaeplastida
LOC_Os08g43334.1 No alias transcription factor (HSF) 0.01 Archaeplastida
Smo107503 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
Solyc03g097120.3.1 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.01 Archaeplastida
Solyc04g016000.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc06g053960.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e003755_P002 No alias transcription factor (HSF) 0.01 Archaeplastida
Zm00001e004752_P001 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e024268_P001 No alias transcription factor (HSF) 0.01 Archaeplastida
Zm00001e037165_P002 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e041441_P001 No alias transcription factor (HSF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 37 126
No external refs found!