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  5. LOC_Os03g29760.2

LOC_Os03g29760.2


Description : component NF-YA of NF-Y transcription factor complex


Gene families : OG0000500 (Archaeplastida) Phylogenetic Tree(s): OG0000500_tree ,
OG_05_0000477 (LandPlants) Phylogenetic Tree(s): OG_05_0000477_tree ,
OG_06_0012259 (SeedPlants) Phylogenetic Tree(s): OG_06_0012259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g29760.2
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AT1G72830 HAP2C, NF-YA3, ATHAP2C nuclear factor Y, subunit A3 0.05 Archaeplastida
AT3G14020 NF-YA6 nuclear factor Y, subunit A6 0.04 Archaeplastida
AT3G20910 NF-YA9 nuclear factor Y, subunit A9 0.04 Archaeplastida
GSVIVT01015120001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01022601001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Gb_32704 No alias component NF-YA of NF-Y transcription factor complex 0.03 Archaeplastida
LOC_Os07g41720.1 No alias component NF-YA of NF-Y transcription factor complex 0.08 Archaeplastida
Zm00001e003228_P001 No alias component NF-YA of NF-Y transcription factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001289 NFYA 164 219
No external refs found!