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  5. LOC_Os03g30570.1

LOC_Os03g30570.1


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g30570.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00036030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
AT1G69260 AFP1 ABI five binding protein 0.09 Archaeplastida
AT3G07255 No alias No description available 0.03 Archaeplastida
AT3G29575 AFP3 ABI five binding protein 3 0.12 Archaeplastida
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 Archaeplastida
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.08 Archaeplastida
Gb_29524 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
Pp3c2_19780V3.1 No alias novel interactor of JAZ 0.04 Archaeplastida
Smo402278 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
Smo446487 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
Solyc02g030630.2.1 No alias No annotation 0.04 Archaeplastida
Solyc02g066900.3.1 No alias No annotation 0.02 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.06 Archaeplastida
Solyc05g012210.4.1 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
Zm00001e002002_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 236 298
IPR032310 NINJA_B 86 127
IPR012463 Ninja_motif 30 67
No external refs found!