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  5. AMTR_s00003p00271650

AMTR_s00003p00271650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.464

Description : Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana


Gene families : OG0004177 (Archaeplastida) Phylogenetic Tree(s): OG0004177_tree ,
OG_05_0002901 (LandPlants) Phylogenetic Tree(s): OG_05_0002901_tree ,
OG_06_0003399 (SeedPlants) Phylogenetic Tree(s): OG_06_0003399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00271650
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000458001 No alias Uncharacterized GPI-anchored protein At4g28100... 0.07 Archaeplastida
GSVIVT01008405001 No alias Uncharacterized GPI-anchored protein At4g28100... 0.04 Archaeplastida
LOC_Os07g37156.1 No alias Uncharacterized GPI-anchored protein At4g28100... 0.05 Archaeplastida
MA_12527g0010 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 Archaeplastida
MA_210219g0010 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 Archaeplastida
MA_33094g0010 No alias Uncharacterized GPI-anchored protein At4g28100... 0.02 Archaeplastida
Mp2g08190.1 No alias Uncharacterized GPI-anchored protein At4g28100... 0.04 Archaeplastida
Solyc07g054850.3.1 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 Archaeplastida
Zm00001e010543_P002 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!