1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00004p00026400

AMTR_s00004p00026400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.10

Description : Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana


Gene families : OG0003420 (Archaeplastida) Phylogenetic Tree(s): OG0003420_tree ,
OG_05_0002877 (LandPlants) Phylogenetic Tree(s): OG_05_0002877_tree ,
OG_06_0009470 (SeedPlants) Phylogenetic Tree(s): OG_06_0009470_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00026400
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Solyc01g091450.3.1 No alias Pentatricopeptide repeat-containing protein At1g01970... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 163 186
IPR002885 Pentatricopeptide_repeat 234 260
IPR002885 Pentatricopeptide_repeat 269 297
IPR002885 Pentatricopeptide_repeat 341 368
IPR002885 Pentatricopeptide_repeat 199 228
No external refs found!