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  5. LOC_Os03g47530.1

LOC_Os03g47530.1


Description : galacturonosyltransferase


Gene families : OG0000616 (Archaeplastida) Phylogenetic Tree(s): OG0000616_tree ,
OG_05_0000491 (LandPlants) Phylogenetic Tree(s): OG_05_0000491_tree ,
OG_06_0000335 (SeedPlants) Phylogenetic Tree(s): OG_06_0000335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g47530.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00258170 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.04 Archaeplastida
AMTR_s00025p00136940 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.03 Archaeplastida
AT1G19300 GLZ1, GATL1,... Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Archaeplastida
AT1G24170 GATL8, LGT9 Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Archaeplastida
AT1G70090 GATL9, LGT8 glucosyl transferase family 8 0.04 Archaeplastida
AT3G06260 GATL4 galacturonosyltransferase-like 4 0.02 Archaeplastida
AT4G02130 LGT10, GATL6 galacturonosyltransferase 6 0.05 Archaeplastida
GSVIVT01009639001 No alias Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.03 Archaeplastida
GSVIVT01011066001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011949001 No alias Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020141001 No alias Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01032581001 No alias Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_30431 No alias galacturonosyltransferase 0.05 Archaeplastida
Gb_37205 No alias galacturonosyltransferase 0.07 Archaeplastida
LOC_Os03g18890.1 No alias galacturonosyltransferase 0.03 Archaeplastida
LOC_Os03g24510.1 No alias galacturonosyltransferase 0.06 Archaeplastida
LOC_Os06g13760.1 No alias galacturonosyltransferase 0.04 Archaeplastida
LOC_Os07g45260.1 No alias galacturonosyltransferase 0.06 Archaeplastida
MA_10432403g0010 No alias galacturonosyltransferase 0.04 Archaeplastida
MA_130934g0010 No alias galacturonosyltransferase 0.02 Archaeplastida
MA_88535g0010 No alias galacturonosyltransferase 0.02 Archaeplastida
Mp2g19350.1 No alias galacturonosyltransferase 0.06 Archaeplastida
Pp3c16_25090V3.1 No alias glucosyl transferase family 8 0.03 Archaeplastida
Pp3c1_18380V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Archaeplastida
Solyc01g100210.3.1 No alias galacturonosyltransferase 0.03 Archaeplastida
Solyc02g087350.3.1 No alias galacturonosyltransferase 0.07 Archaeplastida
Solyc05g006510.2.1 No alias galacturonosyltransferase 0.06 Archaeplastida
Solyc09g074080.3.1 No alias galacturonosyltransferase 0.04 Archaeplastida
Zm00001e001733_P001 No alias galacturonosyltransferase 0.02 Archaeplastida
Zm00001e007430_P001 No alias galacturonosyltransferase 0.06 Archaeplastida
Zm00001e015772_P001 No alias galacturonosyltransferase 0.08 Archaeplastida
Zm00001e035724_P001 No alias galacturonosyltransferase 0.04 Archaeplastida
Zm00001e036043_P001 No alias galacturonosyltransferase 0.08 Archaeplastida
Zm00001e038370_P001 No alias galacturonosyltransferase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 67 332
No external refs found!