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  5. LOC_Os03g50210.1

LOC_Os03g50210.1


Description : no hits & (original description: none)


Gene families : OG0000273 (Archaeplastida) Phylogenetic Tree(s): OG0000273_tree ,
OG_05_0004164 (LandPlants) Phylogenetic Tree(s): OG_05_0004164_tree ,
OG_06_0002655 (SeedPlants) Phylogenetic Tree(s): OG_06_0002655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50210.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00106850 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00003p00244140 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00036p00232910 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G13340 No alias Regulator of Vps4 activity in the MVB pathway protein 0.04 Archaeplastida
AT2G19710 No alias Regulator of Vps4 activity in the MVB pathway protein 0.05 Archaeplastida
GSVIVT01001596001 No alias No description available 0.03 Archaeplastida
GSVIVT01011918001 No alias No description available 0.09 Archaeplastida
GSVIVT01015242001 No alias No description available 0.06 Archaeplastida
GSVIVT01017099001 No alias No description available 0.03 Archaeplastida
Gb_14681 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_14953 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434372g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g09120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_18360V3.1 No alias Regulator of Vps4 activity in the MVB pathway protein 0.02 Archaeplastida
Pp3c2_13590V3.1 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Archaeplastida
Solyc05g009550.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g066690.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g032230.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005061 Ist1 20 183
No external refs found!