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  5. LOC_Os03g50920.1

LOC_Os03g50920.1


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50920.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00085480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 Archaeplastida
AT1G14687 AtHB32, HB32, ZHD14 homeobox protein 32 0.03 Archaeplastida
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.03 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.03 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.05 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.03 Archaeplastida
GSVIVT01009721001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011415001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_15163 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os02g47770.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os08g34010.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.07 Archaeplastida
LOC_Os11g03420.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_101972g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_10433477g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_57426g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_91212g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Mp8g08190.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Solyc02g067320.3.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc02g067330.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc05g007580.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e018364_P001 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 11 59
No external refs found!