LOC_Os03g53050.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g53050.1
Cluster	HCCA: Cluster_178

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00165950	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00216880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.02	Archaeplastida
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.03	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.02	Archaeplastida
AT4G01720	AtWRKY47, WRKY47	WRKY family transcription factor	0.04	Archaeplastida
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.02	Archaeplastida
AT5G26170	ATWRKY50, WRKY50	WRKY DNA-binding protein 50	0.02	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Gb_01527	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Gb_05026	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Gb_08731	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_26411	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g09080.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g46800.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os11g45920.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
LOC_Os12g02420.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os12g32250.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_101135g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10429098g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_136551g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_23415g0010	No alias	transcription factor (WRKY)	0.05	Archaeplastida
MA_306130g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_310991g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_38938g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_53351g0010	No alias	transcription factor (WRKY)	0.01	Archaeplastida
MA_65782g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_74833g0010	No alias	transcription factor (WRKY)	0.08	Archaeplastida
MA_7893884g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_892467g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_8979233g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
Pp3c7_7550V3.1	No alias	WRKY DNA-binding protein 11	0.01	Archaeplastida
Smo66769	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
Solyc02g094270.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc04g051690.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g007110.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc06g070990.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc09g066010.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g006170.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e007070_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e026828_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e027989_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e028011_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e029049_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e031159_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e034150_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	322	379
IPR018872	Zn-cluster-dom	274	318

External Links

No external refs found!

LOC_Os03g53050.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation