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  5. LOC_Os03g53500.1

LOC_Os03g53500.1


Description : ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza sativa subsp. japonica (sp|q10d00|suv3m_orysj : 1173.0)


Gene families : OG0002220 (Archaeplastida) Phylogenetic Tree(s): OG0002220_tree ,
OG_05_0010099 (LandPlants) Phylogenetic Tree(s): OG_05_0010099_tree ,
OG_06_0009489 (SeedPlants) Phylogenetic Tree(s): OG_06_0009489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53500.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271940 evm_27.TU.AmTr_v1... ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.04 Archaeplastida
GSVIVT01011395001 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.02 Archaeplastida
MA_10431670g0010 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.01 Archaeplastida
MA_185116g0020 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.01 Archaeplastida
Solyc11g011460.2.1 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR022192 SUV3_C 493 540
IPR001650 Helicase_C 244 345
No external refs found!