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  5. LOC_Os03g53610.1

LOC_Os03g53610.1


Description : Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum (sp|p09444|lea34_goshi : 110.0)


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53610.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.12 Archaeplastida
AT3G22500 ATECP31 Seed maturation protein 0.13 Archaeplastida
AT5G53260 No alias Seed maturation protein 0.08 Archaeplastida
AT5G53270 No alias Seed maturation protein 0.05 Archaeplastida
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.07 Archaeplastida
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.11 Archaeplastida
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.11 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_326206g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c25_10310V3.1 No alias Seed maturation protein 0.03 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.08 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.09 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
Zm00001e000449_P001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.1 Archaeplastida
Zm00001e005665_P002 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
Zm00001e005666_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 156 205
IPR007011 SMP 19 74
No external refs found!