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  5. LOC_Os03g55014.1

LOC_Os03g55014.1


Description : no hits & (original description: none)


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55014.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!