Description : component psRPS9 of small ribosomal subunit proteome
Gene families : OG0001974 (Archaeplastida) Phylogenetic Tree(s): OG0001974_tree ,
OG_05_0007849 (LandPlants) Phylogenetic Tree(s): OG_05_0007849_tree ,
OG_06_0009917 (SeedPlants) Phylogenetic Tree(s): OG_06_0009917_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g55930.1 | |
Cluster | HCCA: Cluster_90 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00170510 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.02 | Archaeplastida | |
AT1G74970 | TWN3, RPS9 | ribosomal protein S9 | 0.26 | Archaeplastida | |
Cre02.g106750 | No alias | No description available | 0.01 | Archaeplastida | |
GSVIVT01009628001 | No alias | Protein biosynthesis.organelle translation... | 0.13 | Archaeplastida | |
Gb_29571 | No alias | 30S ribosomal protein S9, chloroplastic OS=Arabidopsis... | 0.06 | Archaeplastida | |
Gb_39922 | No alias | 30S ribosomal protein S9, chloroplastic OS=Spinacia... | 0.06 | Archaeplastida | |
MA_141286g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
MA_18349g0020 | No alias | 30S ribosomal protein S9, chloroplastic OS=Spinacia... | 0.07 | Archaeplastida | |
Mp3g01740.1 | No alias | component psRPS9 of small ribosomal subunit proteome | 0.27 | Archaeplastida | |
Pp3c12_1790V3.1 | No alias | ribosomal protein S9 | 0.14 | Archaeplastida | |
Pp3c9_4940V3.1 | No alias | ribosomal protein S9 | 0.09 | Archaeplastida | |
Smo17067 | No alias | 30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea | 0.03 | Archaeplastida | |
Solyc04g079790.3.1 | No alias | component psRPS9 of small ribosomal subunit proteome | 0.17 | Archaeplastida | |
Zm00001e005809_P002 | No alias | component psRPS9 of small ribosomal subunit proteome | 0.33 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006450 | regulation of translational fidelity | IEP | Neighborhood |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
CC | GO:0009507 | chloroplast | IEP | Neighborhood |
CC | GO:0009521 | photosystem | IEP | Neighborhood |
CC | GO:0009523 | photosystem II | IEP | Neighborhood |
CC | GO:0009536 | plastid | IEP | Neighborhood |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Neighborhood |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0051920 | peroxiredoxin activity | IEP | Neighborhood |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000754 | Ribosomal_S9 | 102 | 223 |
No external refs found! |