LOC_Os03g56580.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0004181 (SeedPlants) Phylogenetic Tree(s): OG_06_0004181_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g56580.1
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00242720	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00022p00094930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00082p00116910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00092p00142980	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00099p00163300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00119p00045570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.04	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT2G17040	NAC036, anac036	NAC domain containing protein 36	0.04	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.04	Archaeplastida
AT3G04060	anac046, NAC046	NAC domain containing protein 46	0.04	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.04	Archaeplastida
AT3G10500	NAC053, anac053	NAC domain containing protein 53	0.02	Archaeplastida
AT3G12910	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.04	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.06	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.04	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.04	Archaeplastida
AT5G18270	ANAC087	Arabidopsis NAC domain containing protein 87	0.04	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.04	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.04	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.04	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01008839001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01013671001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01020384001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020389001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01022354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01025515001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01033032001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_17883	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_20015	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_20626	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_28016	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_35309	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_37440	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_41540	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_41742	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os02g36880.2	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g21060.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os06g46270.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g04560.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_103386g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_10431189g0020	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10434668g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_122815g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_183543g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_208415g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_264971g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_40991g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.07	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
Mp2g07720.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02590.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g20920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c13_20650V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c16_19830V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c24_8270V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Smo74001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc04g009440.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc07g063420.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc12g056790.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e001536_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e001540_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e002416_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e004141_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007603_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e013320_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e028872_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e030150_P001	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034563_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e035884_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e037088_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	40	170

External Links

No external refs found!

LOC_Os03g56580.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation