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  5. LOC_Os03g59120.1

LOC_Os03g59120.1


Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 412.0)


Gene families : OG0001120 (Archaeplastida) Phylogenetic Tree(s): OG0001120_tree ,
OG_05_0004975 (LandPlants) Phylogenetic Tree(s): OG_05_0004975_tree ,
OG_06_0005252 (SeedPlants) Phylogenetic Tree(s): OG_06_0005252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59120.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 evm_27.TU.AmTr_v1... Protochlorophyllide-dependent translocon component 52,... 0.04 Archaeplastida
AMTR_s00140p00074640 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.05 Archaeplastida
AT4G25650 TIC55-IV,... ACD1-like 0.05 Archaeplastida
Cpa|evm.model.tig00000681.17 No alias Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre10.g450550 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01025446001 No alias Protochlorophyllide-dependent translocon component 52,... 0.07 Archaeplastida
Gb_36694 No alias Protochlorophyllide-dependent translocon component 52,... 0.07 Archaeplastida
Gb_37383 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Gb_37385 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
MA_10436082g0010 No alias Protochlorophyllide-dependent translocon component 52,... 0.03 Archaeplastida
MA_12148g0010 No alias Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Mp6g13750.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.03 Archaeplastida
Pp3c1_40790V3.1 No alias Pheophorbide a oxygenase family protein with Rieske... 0.02 Archaeplastida
Pp3c2_6220V3.1 No alias ACD1-like 0.02 Archaeplastida
Pp3c3_19130V3.1 No alias Pheophorbide a oxygenase family protein with Rieske... 0.03 Archaeplastida
Solyc04g040160.4.1 No alias Protochlorophyllide-dependent translocon component 52,... 0.06 Archaeplastida
Solyc11g066440.2.1 No alias pheophorbide a oxygenase (PAO) 0.03 Archaeplastida
Zm00001e006067_P001 No alias Protochlorophyllide-dependent translocon component 52,... 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013626 PaO 306 382
IPR017941 Rieske_2Fe-2S 83 167
No external refs found!