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  5. LOC_Os03g59770.1

LOC_Os03g59770.1


Description : no hits & (original description: none)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0013022 (SeedPlants) Phylogenetic Tree(s): OG_06_0013022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59770.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.04 Archaeplastida
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.03 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G15680 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.05 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.03 Archaeplastida
AT4G37010 CEN2 centrin 2 0.03 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.04 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_23652 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g53200.1 No alias Calmodulin-like protein 4 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_10431273g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_158316g0010 No alias Probable calcium-binding protein CML13 OS=Oryza sativa... 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g00920.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Mp2g14930.1 No alias Probable calcium-binding protein CML23 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g20450.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c16_23390V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.08 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc07g007950.1.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g074740.2.1 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e009835_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.06 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.06 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 146 210
No external refs found!