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  5. LOC_Os03g60080.1

LOC_Os03g60080.1


Description : transcription factor (NAC)


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g60080.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00193150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00001p00242720 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00009p00259320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00016p00196760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00018p00070180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00022p00094930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AMTR_s00058p00136280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00082p00116910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00113p00077540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AMTR_s00119p00026870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00119p00040230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00119p00045570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
AMTR_s00149p00068500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AT1G01720 ANAC002, ATAF1 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.03 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.06 Archaeplastida
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.02 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.03 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.02 Archaeplastida
AT1G54330 ANAC020, NAC020 NAC domain containing protein 20 0.03 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.03 Archaeplastida
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.03 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.03 Archaeplastida
AT1G77450 NAC032, anac032 NAC domain containing protein 32 0.04 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT2G17040 NAC036, anac036 NAC domain containing protein 36 0.03 Archaeplastida
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.03 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.03 Archaeplastida
AT3G12910 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.05 Archaeplastida
AT3G29035 ATNAC3, NAC3, ANAC059 NAC domain containing protein 3 0.02 Archaeplastida
AT3G49530 ANAC062, NAC062, NTL6 NAC domain containing protein 62 0.08 Archaeplastida
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.03 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.05 Archaeplastida
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT4G28530 anac074, NAC074 NAC domain containing protein 74 0.04 Archaeplastida
AT4G35580 NTL9 NAC transcription factor-like 9 0.03 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.03 Archaeplastida
AT5G04400 NAC077, anac077 NAC domain containing protein 77 0.03 Archaeplastida
AT5G08790 anac081, ATAF2 NAC (No Apical Meristem) domain transcriptional... 0.07 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.04 Archaeplastida
AT5G24590 ANAC091, TIP No description available 0.13 Archaeplastida
AT5G39820 NAC094, anac094 NAC domain containing protein 94 0.05 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.05 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.04 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01007194001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01007982001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01008839001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014403001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
GSVIVT01018623001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01019702001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020384001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020478001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020834001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01022354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
GSVIVT01023921001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01025515001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01033032001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01033374001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01038666001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
Gb_02849 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_12202 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_13930 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_17883 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_20626 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_22607 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_27819 No alias transcription factor (KNOX). transcription factor (NAC) 0.02 Archaeplastida
Gb_32549 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_35048 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_40805 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_41026 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_41540 No alias transcription factor (NAC) 0.07 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os03g56580.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os04g38720.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os04g59470.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os06g51070.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os07g37920.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os07g48450.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os10g42130.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os11g08210.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os12g29330.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os12g41680.1 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_103386g0010 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_10436448g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_137415g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_183543g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_1948g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_208415g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_23113g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_264971g0010 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5115g0010 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_64687g0010 No alias transcription factor (NAC) 0.09 Archaeplastida
MA_75192g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_80232g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_86256g0010 No alias transcription factor (NAC) 0.07 Archaeplastida
MA_98483g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp2g07720.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp4g11910.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02590.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02620.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp6g02670.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Pp3c13_10800V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c16_19830V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c3_8880V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c5_630V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c5_740V3.1 No alias NAC domain containing protein 25 0.02 Archaeplastida
Pp3c6_1310V3.1 No alias NAC domain containing protein 70 0.02 Archaeplastida
Smo147012 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
Solyc01g009860.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc02g069960.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc02g088180.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc03g080090.4.1 No alias transcription factor (NAC) 0.07 Archaeplastida
Solyc03g098190.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc04g005610.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc04g009440.3.1 No alias transcription factor (NAC) 0.08 Archaeplastida
Solyc05g007550.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc05g007770.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g060230.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g073050.2.1 No alias transcription factor (NAC) 0.07 Archaeplastida
Solyc07g045030.4.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc07g066330.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc08g006020.4.1 No alias transcription factor (NAC) 0.07 Archaeplastida
Solyc10g005010.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g006880.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc10g055760.2.1 No alias transcription factor (NAC) 0.09 Archaeplastida
Solyc11g008010.2.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc11g017470.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc12g013620.2.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc12g017400.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc12g056790.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e001536_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e001540_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e004141_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e005094_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e006136_P001 No alias transcription factor (NAC) 0.08 Archaeplastida
Zm00001e006914_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e009384_P001 No alias transcription factor (NAC) 0.08 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.08 Archaeplastida
Zm00001e012429_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e012982_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e013320_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e014924_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019046_P002 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e019473_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e021857_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e022817_P003 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e023019_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e024028_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e028872_P002 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e033142_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e035277_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e035884_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e037804_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e038267_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e039246_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039557_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e040938_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e042141_P001 No alias NAC domain-containing protein 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 18 142
No external refs found!